CDS

Accession Number TCMCG005C26599
gbkey CDS
Protein Id XP_020274529.1
Location join(148308210..148308248,148309696..148309850,148309959..148310060,148310132..148310159,148310227..148310258,148310353..148310410,148310496..148310582,148310970..148311026,148311608..148311709,148311816..148311860,148312224..148312301,148410543..148410593,148410683..148410764,148411641..148411711,148411778..148411874,148412078..148412174,148412256..148412345,148412758..148412822,148412897..148412955,148422171..148422247,148422335..148422421,148422503..148422564,148422654..148422715,148422993..148423046,148423132..148423217,148423303..148423334,148423410..148423433,148423955..148424070,148424300..148424386)
Gene LOC109849128
GeneID 109849128
Organism Asparagus officinalis

Protein

Length 693aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020418940.1
Definition DNA mismatch repair protein MSH5 isoform X4

EGGNOG-MAPPER Annotation

COG_category L
Description ATPase domain of DNA mismatch repair MUTS family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGATGGATTAACAGTCAAGGAGAGGATTTTCTTTCTTAATTCTATGATTGATCTTGGAAGTGAAGTTCAAGTTCGTGCTGGTGGGGGGCTTCTTGCCATACTGGAGAATGAGAGGCTTGTGGATACCTATGAACAAATGGAATCTGGCAACTCATCTATCGCCATTGATTGTGTGTCACAGATCTCATTGGACAAGTTCCTTAAACTAGATGCAGCTGCTCATGAGGCTCTGCAGATTTTTCAAATTGACAAGCATCCAAGTCATATGGGAATTGGAAGAGCAAAAGAGGGATTCTCGGTTTTCGGAATGTTTAACAAGTGCATCACACCAATGGGAAGGCGTCTCTTGAGGACTTGGTTTTTGAGGCCAATACTTGACCTTGACATTTTGAACAATCGGCTCAACACAATATCATTCTTCCTTTGTTGCGAAGAAGTGGTGTCTGCTTTACGGCAAACATTGAAGTCCGTTAGAGATGTTCCTCATATGCTAAAGAAATTCAATTCCCCAAGTTCCTCGTGTACGAGTGGCGATTGGAATGCATTCTTGAAGTGTATTTGTTCGCTGTTGCACATAAACAAAATCTTTGAAGTTGGTATTTCAGAATACCTTCAGGAAAGGTTGGAACATTTGAGTTTACGATTAGTGGAAAAGGCAAGCTCATGTATTACGATGGAGCTGGTTTATGTCTTTGACTTGGTAACTGGTGTGATTGACATTCAGCGATCTAAGGAAAAAGGGTACGAGACATTAGTAAAAGAAGGGCTCTGCGAAGAGTTGGACGAGCTGAGGACTGTGTATGAGGAACTGCCGGATCTTCTGGATCAGGTGTCAGCATCTGAAAATGCTTCTCTTCCTCTTATGCATGATAATAACAGAGCTCCACATATTGTGTATGTTCATCAAATAGGATACTTAATGTGTACTTATGATAAGCTTGAAGAAGAGGACCTGCAACAGCTTCAAGATTTTGAATTTGCGTTTTCAGAAGATGGGGATGAGAAGAAATATTTTTATCACACTTTCAAAACTAGAGAATTGGACAACCTTCTTGGAGATATATATCATAAGATTCTTGACATGGAGAGAGCAATTATAAGAGACTTGGTGACTCGCATTCTCCAATTCACACCTCAGCTGATAAAGGCTGTGAATTTTGCTGCAGAGCTTGATTGCTTTCTTTCACTGGCATTAGTTGCTCGTCAAAACAATTATGTGAGACCGATCTTGACTGACGATTCATTGATTGACATTCAAAACGGAAGGCATGTTTTGCAGGAAATGACTGTTGATACTTTTGTACCTAATGATACAAAAATTCTCAATGATGGGAGAATAAACATAATCACTGGTCCAAACTACTCGGGAAAAAGCATTTATGTTAAACAGGTGGCTTTGGTGGTTTTTCTTTCTCATGTTGGAAGTTTCGTACCAGCGGATGGTGCTGTTATTGGAATAACTGATAGGATTTTTTGTGCTATGGGAAGCAAGTCCATGACAGCAGAACAATCATCTTTCATGATTGATCTTCATCAAGTGGGAATGATGCTTAGGCAGGCAACACCTCGGTCTTTGTGTTTGTTGGATGAATTTGGCAAGGGTACTTTAACAGAAGATGGCATTGGACTCCTTGGAGGGATTATACTCCATTTTGCTAATTATGAATTTCCTCCAAAGGTTTTGTTGTGCACACACTTGACAGAAATGTTCAATGATAATGTCTTAATGAAGTCTGAAAATATCAAGTTTTACACCATGAGTGTGTTGAAGCCTGGCAACAACTGTGTGAGTGTAGATGACATCGTTTTTCTTTACCGGCTAATACCCGGGCATGCACTCCTGAGTTATGGATTACATTGTGCACGACTGGCTGGAGTTCCTGAGGAGGTTGTCAAAAGGGCAACTTTGGTTTTGGACGCACTGAAGTCTAATGAGCCAATCAGCCGTTTGGCTAACCAGAAAATATTGGCTAAAGATCAGCAATGCAAGGATGCAGTTGCTAAAATGCTGACTTTCGATGCTTACAAAGGTGACCTCGAGCAATTCTTTCAAGAAATTTTCCCCGCCGAGTTCTGA
Protein:  
MDDGLTVKERIFFLNSMIDLGSEVQVRAGGGLLAILENERLVDTYEQMESGNSSIAIDCVSQISLDKFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMFNKCITPMGRRLLRTWFLRPILDLDILNNRLNTISFFLCCEEVVSALRQTLKSVRDVPHMLKKFNSPSSSCTSGDWNAFLKCICSLLHINKIFEVGISEYLQERLEHLSLRLVEKASSCITMELVYVFDLVTGVIDIQRSKEKGYETLVKEGLCEELDELRTVYEELPDLLDQVSASENASLPLMHDNNRAPHIVYVHQIGYLMCTYDKLEEEDLQQLQDFEFAFSEDGDEKKYFYHTFKTRELDNLLGDIYHKILDMERAIIRDLVTRILQFTPQLIKAVNFAAELDCFLSLALVARQNNYVRPILTDDSLIDIQNGRHVLQEMTVDTFVPNDTKILNDGRINIITGPNYSGKSIYVKQVALVVFLSHVGSFVPADGAVIGITDRIFCAMGSKSMTAEQSSFMIDLHQVGMMLRQATPRSLCLLDEFGKGTLTEDGIGLLGGIILHFANYEFPPKVLLCTHLTEMFNDNVLMKSENIKFYTMSVLKPGNNCVSVDDIVFLYRLIPGHALLSYGLHCARLAGVPEEVVKRATLVLDALKSNEPISRLANQKILAKDQQCKDAVAKMLTFDAYKGDLEQFFQEIFPAEF